Virus name database

C : American Society for Microbiology. Carolus Linnaeus Systema naturae, General Assembly Ride W. London : International Trust for Zoological Nomenclature. Adams M. Schleifer K. Tracking the changes in virus taxonomy. Simmonds P. Methods for virus classification and the challenge of incorporating metagenomic sequence data. Knipe D. Fields Virology. Buchen-Osmond C. Baltimore D. Expression of animal virus genomes. Lefkowitz E. Manual of Clinical Microbiology. C : ASM Press.

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Oxford University Press is a department of the University of Oxford. It furthers the University's objective of excellence in research, scholarship, and education by publishing worldwide. Sign In or Create an Account. Sign In. Advanced Search. Search Menu. Article Navigation. Close mobile search navigation Article Navigation. Volume Article Contents Abstract. To whom correspondence should be addressed. Oxford Academic.

Donald M Dempsey. Robert Curtis Hendrickson. Richard J Orton. Stuart G Siddell. Donald B Smith. Revision received:. Select Format Select format. Permissions Icon Permissions. Table 1. Database Records for the Species Measles morbillivirus. Table Field. Record 1. Sequences can be downloaded, and it is possible to analyze them using the multiple sequence alignment or tree building tool integrated to the database.

Required segments: What are the required segments? Select all Full-length only Full-length plus. Collection date must contain:. National Center for Biotechnology Information , U. Analyze data online:.

Sign up for a workbench to:. Use your workbench to:. Decoration options let you color tree leaves by metadata. Export image and legend, or download trees as Newick or PhyloXml files for other viewing software.

The ViPR Workbench allows users to save 'working sets' of sequences, searches and analysis results between web sessions in their own private workspace. Users can share working sets or analysis results with collaborators. Mature viral protein products resulting from protease- and self-cleavage of the polyprotein are displayed according to their location in the genome and the polyprotein. Compute and visualize multiple sequence alignments together with derived consensus sequence and conservation score within ViPR.

Visualize protein structures in 3D. Users can highlight experimentally determined epitopes on the structure. This system is provided for authorized users only. Anyone using this system expressly consents to monitoring while using the system. Improper use of this system may be referred to law enforcement officials. This project is funded by the U. This is a collaboration between the University of Chicago and J.

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